M. A.  Telang, Giri, A. P., Sainani, M. N., and Gupta, V. S., ?Characterization of two midgut proteinases of helicoverpa armigera and their interaction with proteinase inhibitors?, Journal of Insect Physiology, vol. 51, no. 5, pp. 513-522, 2005.

N. P.  Chougule, Giri, A. P., Sainani, M. N., and Gupta, V. S., ?Gene expression patterns of helicoverpa armigera gut proteases?, Insect Biochemistry and Molecular Biology, vol. 35, no. 4, pp. 355-367, 2005.

M. S.  Damle, Giri, A. P., Sainani, M. N., and Gupta, V. S., ?Higher accumulation of proteinase inhibitors in flowers than leaves and fruits as a possible basis for differential feeding preference of Helicoverpa armigera on tomato (Lycopersicon esculentum Mill, Cv. Dhanashree)?, Phytochemistry, vol. 66, no. 22, pp. 2659-2667, 2005.

V. A.  Tamhane, Chougule, N. P., Giri, A. P., Dixit, A. R., Sainani, M. N., and Gupta, V. S., ?In vivo and in vitro effect of capsicum annum proteinase inhibitors on helicoverpa armigera gut proteinases?, Biochimica Et Biophysica Acta-General Subjects, vol. 1722, no. 2, pp. 156-167, 2005.

D.  De, Dutta, D., Kundu, M., Mahato, S., Schiavone, M. T., Chaudhuri, S., Giri, A. P., Gupta, V., and Bhattacharya, S. K., ?Inactive enzymatic mutant proteins (phosphoglycerate mutase and enolase) as sugar binders for ribulose-1,5-bisphosphate regeneration reactors?, Microbial Cell Factories, vol. 4, p. Article No. 5, 2005.

A.  Srinivasan, Giri, A. P., Harsulkar, A. M., Gatehouse, J. A., and Gupta, V. S., ?Kunitz trypsin inhibitor from chickpea (Cicer arietinum L.) that exerts anti-metabolic effect on podborer (Helicoverpa armigera) larvae?, Plant Molecular Biology, vol. 57, no. 3, pp. 359-374, 2005.

A.  Srinivasan, Chougule, N. P., Giri, A. P., Gatehouse, J. A., and Gupta, V. S., ?Podborer (Helicoverpa armigera Hubn.) does not show specific adaptations in gut proteinases to dietary Cicer arietinum Kunitz proteinase inhibitor?, Journal of Insect Physiology, vol. 51, no. 11, pp. 1268-1276, 2005.

V. K.  Hivrale, Chougule, N. P., Chhabda, P. J., Giri, A. P., and Kachole, M. S., ?Unraveling biochemical properties of cockroach (Periplaneta americana) proteinases with a gel X-ray film contact print method?, Comparative Biochemistry and Physiology B-Biochemistry & Molecular Biology, vol. 141, no. 3, pp. 261-266, 2005.

S. B.  Nimbalkar, Harsulkar, A. M., Giri, A. P., Sainani, M. N., Franceschi, V. R., and Gupta, V. S., ?Differentially expressed gene transcripts in roots of resistant and susceptible chickpea plant (Cicer arietinum L.) upon Fusarium oxysporum infection?, Physiological and Molecular Plant Pathology, vol. 68, no. 4-6, pp. 176-188, 2006.

A. P.  Giri, Wuensche, H., Mitra, S. Sribas, Zavala, J. A., Muck, A., Svatos, A., and Baldwin, I. T., ?Molecular interactions between the specialist herbivore Manduca sexta (Lepidoptera, Sphingidae) and its natural host Nicotiana attenuata. VII. changes in the plant's proteome?, Plant Physiology, vol. 142, no. 4, pp. 1621-1641, 2006.

V. A.  Tamhane, Giri, A. P., Sainani, M. N., and Gupta, V. S., ?Diverse forms of pin-II family proteinase inhibitors from capsicum annuum adversely affect the growth and development of helicoverpa armigera?, Gene, vol. 403, no. 1-2, pp. 29-38, 2007.

S. S.  Pandit, Mitra, S. Sribas, Giri, A. P., Pujari, K. H., Patil, B. P., Jambhale, N. D., and Gupta, V. S., ?Genetic diversity analysis of mango cultivars using inter simple sequence repeat markers?, Current Science, vol. 93, no. 8, pp. 1135-1141, 2007.

S. Subhash Pandit, Mitra, S. Sribas, Giri, A. P., and Gupta, V. Shrikant, ?Quick method for isolating RNA from raw and ripe fleshy fruits as well as for co-isolating DNA and RNA from polysaccharide- and polyphenol-rich leaf tissues?, Journal of Plant Biology, vol. 50, no. 1, pp. 60-64, 2007.

J. A.  Zavala, Giri, A. P., Jongsma, M. A., and Baldwin, I. T., ?Digestive duet: midgut digestive proteinases of manduca sexta ingesting nicotiana attenuata with manipulated trypsin proteinase inhibitor expression?, Plos One, vol. 3, no. 4, p. e2008, 2008.

S. S.  Pandit, Kulkarni, R. S., Chidley, H. G., Giri, A. P., Pujari, K. H., Koellner, T. G., Degenhardt, J., Gershenzon, J., and Gupta, V. S., ?Changes in volatile composition during fruit development and ripening of `Alphonso' mango?, Journal of the Science of Food and Agriculture, vol. 89, no. 12, pp. 2071-2081, 2009.

S. S.  Pandit, Chidley, H. G., Kulkarni, R. S., Pujari, K. H., Giri, A. P., and Gupta, V. S., ?Cultivar relationships in mango based on fruit volatile profiles?, Food Chemistry, vol. 114, no. 1, pp. 363-372, 2009.

G.  Gurjar, Barve, M., Giri, A. P., and Gupta, V., ?Identification of Indian pathogenic races of fusarium oxysporum f. sp ciceris with gene specific, ITS and random markers?, Mycologia, vol. 101, no. 4, pp. 484-495, 2009.

H. M.  Kotkar, Sarate, P. J., Tamhane, V. A., Gupta, V. S., and Giri, A. P., ?Responses of midgut amylases of Helicoverpa armigera to feeding on various host plants?, Journal of Insect Physiology, vol. 55, no. 8, pp. 663-670, 2009.

V. A.  Tamhane, Giri, A. P., Kumar, P., and Gupta, V. S., ?Spatial and temporal expression patterns of diverse Pin-II proteinase inhibitor genes in Capsicum annuum Linn?, Gene, vol. 442, no. 1-2, pp. 88-98, 2009.

M. A.  Telang, Giri, A. P., Pyati, P. S., Gupta, V. S., Tegeder, M., and Franceschi, V. R., ?Winged bean chymotrypsin inhibitors retard growth of Helicoverpla anmigera?, Gene, vol. 431, no. 1-2, pp. 80-85, 2009.

S. S.  Pandit, Kulkarni, R. S., Giri, A. P., Koellner, T. G., Degenhardt, J., Gershenzon, J., and Gupta, V. S., ?Expression profiling of various genes during the fruit development and ripening of mango?, Plant Physiology and Biochemistry, vol. 48, no. 6, pp. 426-433, 2010.

M.  Mishra, Tamhane, V. A., Khandelwal, N., Kulkarni, M. J., Gupta, V. S., and Giri, A. P., ?Interaction of recombinant CanPIs with helicoverpa armigera gut proteases reveals their processing patterns, stability and efficiency?, Proteomics, vol. 10, no. 15, pp. 2845-2857, 2010.

V. V.  Dawkar, Chikate, Y. R., Gupta, V. S., Slade, S. E., and Giri, A. P., ?Assimilatory potential of helicoverpa armigera reared on host (chickpea) and nonhost (cassia tora) diets?, Journal of Proteome Research, vol. 10, no. 11, pp. 5128-5138, 2011.

V. K.  Hivrale, Chougule, N. P., Giri, A. P., Chhabda, P. J., and Kachole, A. S., ?Biochemical characterisation of alpha-amylase inhibitors from achyranthes aspera and their interactions with digestive amylases of coleopteran and lepidopteran insects?, Journal of the Science of Food and Agriculture, vol. 91, no. 10, pp. 1773-1780, 2011.

H. M.  Kotkar, Bhide, A. J., Gupta, V. S., and Giri, A. P., ?Amylase gene expression patterns in Helicoverpa armigera upon feeding on a range of host plants?, Gene, vol. 501, no. 1, pp. 1-7, 2012.

P. J.  Sarate, Tamhane, V. A., Kotkar, H. M., Ratnakaran, N., Susan, N., Gupta, V. S., and Giri, A. P., ?Developmental and digestive flexibilities in the midgut of a polyphagous pest, the cotton bollworm, helicoverpa armigera?, Journal of Insect Science, vol. 12, p. 42, 2012.

S.  Mary, Patil, G. V., Kulkarni, A. V., Kulkarni, M. J., Joshi, S. R., Mehendale, S. S., and Giri, A. P., ?Dynamic proteome in enigmatic preeclampsia: an account of molecular mechanisms and biomarker discovery?, Proteomics Clinical Applications, vol. 6, no. 1-2, pp. 79-90, 2012.

V. A.  Tamhane, Dhaware, D. G., Khandelwal, N., Giri, A. P., and Panchagnula, V., ?Enhanced permeation, leaf retention, and plant protease inhibitor activity with bicontinuous microemulsions?, Journal of Colloid and Interface Science, vol. 383, pp. 177-183, 2012.

R. S.  Kulkarni, Chidley, H. G., Pujari, K. H., Giri, A. P., and Gupta, V. S., ?Geographic variation in the flavour volatiles of alphonso mango?, Food Chemistry, vol. 130, no. 1, pp. 58-66, 2012.

H. S.  Bhonsle, Korwar, A. M., Kote, S. S., Golegaonkar, S. B., Chougale, A. D., Shaik, M. L., Dhande, N. L., Giri, A. P., Shelgikar, K. M., Boppana, R., and Kulkarni, M. J., ?Low plasma albumin levels are associated with increased plasma protein glycation and HbA1c in diabetes?, Journal of Proteome Research, vol. 11, no. 2, pp. 1391-1396, 2012.

V. T.  Barvkar, Pardeshi, V. C., Kale, S. M., Kadoo, N. Y., Giri, A. P., and Gupta, V. S., ?Proteome profiling of flax (linum usitatissimum) seed: characterization of functional metabolic pathways operating during seed development?, Journal of Proteome Research, vol. 11, no. 12, pp. 6264-6276, 2012.

A. D.  Chougale, Bhat, S. P., Bhujbal, S. V., Zambare, M. R., Puntambekar, S., Somani, R. S., Boppana, R., Giri, A. P., and Kulkarni, M. J., ?Proteomic analysis of glycated proteins from streptozotocin-induced diabetic rat kidney?, Molecular Biotechnology, vol. 50, no. 1, pp. 28-38, 2012.

M.  Mishra, Mahajan, N. S., Tamhane, V. A., Kulkarni, M. J., Baldwin, I. T., Gupta, V. S., and Giri, A. P., ?Stress inducible proteinase inhibitor diversity in capsicum annuum?, BMC Plant Biology, vol. 12, p. 217, 2012.

P. R.  Lomate, Jadhav, B. R., Giri, A. P., and Hivrale, V. K., ?Alterations in the helicoverpa armigera midgut digestive physiology after ingestion of pigeon pea inducible leucine aminopeptidase?, Plos One, vol. 8, no. 9, p. e74889, 2013.

M.  Itkin, Heinig, U., Tzfadia, O., Bhide, A. J., Shinde, B., Cardenas, P. D., Bocobza, S. E., Unger, T., Malitsky, S., Finkers, R., Tikunov, Y., Bovy, A., Chikate, Y., Singh, P., Rogachev, I., Beekwilder, J., Giri, A. P., and Aharoni, A., ?Biosynthesis of antinutritional alkaloids in solanaceous crops is mediated by clustered genes?, Science, vol. 341, no. 6142, pp. 175-179, 2013.

P. T.  Sanatan, Lomate, P. R., Giri, A. P., and Hivrale, V. K., ?Characterization of a chemostable serine alkaline protease from Periplaneta americana?, BMC Biochemistry, vol. 14, p. 32, 2013.

R.  Kulkarni, Pandit, S., Chidley, H. G., Nagel, R., Schmidt, A., Gershenzon, J., Pujari, K., Giri, A. P., and Gupta, V., ?Characterization of three novel isoprenyl diphosphate synthases from the terpenoid rich mango fruit?, Plant Physiology and Biochemistry, vol. 71, pp. 121-131, 2013.

R. S.  Joshi, Mishra, M., Suresh, C. G., Gupta, V. S., and Giri, A. P., ?Complementation of intramolecular interactions for structural-functional stability of plant serine proteinase inhibitors?, Biochimica Et Biophysica Acta-General Subjects, vol. 1830, no. 11, pp. 5087-5094, 2013.

Y. R.  Chikate, Tamhane, V. A., Joshi, R. S., Gupta, V. S., and Giri, A. P., ?Differential protease activity augments polyphagy in helicoverpa armigera?, Insect Molecular Biology, vol. 22, no. 3, pp. 258-272, 2013.

M. J.  Kulkarni, Korwar, A. M., Mary, S., Bhonsle, H. S., and Giri, A. P., ?Glycated proteome: from reaction to intervention?, Proteomics Clinical Applications, vol. 7, no. 1-2, pp. 155-170, 2013.

V. V.  Dawkar, Chikate, Y. R., Lomate, P. R., Dholakia, B. B., Gupta, V. S., and Giri, A. P., ?Molecular insights into resistance mechanisms of lepidopteran insect pests against toxicants?, Journal of Proteome Research, vol. 12, no. 11, pp. 4727-4737, 2013.

R.  Kulkarni, Chidley, H. G., Deshpande, A., Schmidt, A., Pujari, K., Giri, A. P., Gershenzon, J., and Gupta, V., ?Oxidoreductase from `Alphonso' mango catalyzing biosynthesis of furaneol and reduction of reactive carbonyls?, SpringerPlus, vol. 2, p. 494, 2013.

N. S.  Mahajan, Mishra, M., Tamhane, V. A., Gupta, V. S., and Giri, A. P., ?Plasticity of protease gene expression in helicoverpa armigera upon exposure to multi-domain capsicum annuum protease inhibitor?, Biochimica et Biophysica Acta (BBA) - General Subjects, vol. 1830, no. 6, pp. 3414?3420, 2013.

S. B.  Bansode, Chougale, A. D., Joshi, R. S., Giri, A. P., Bodhankar, S. L., Harsulkar, A. M., and Kulkarni, M. J., ?Proteomic analysis of protease resistant proteins in the diabetic rat kidney?, Molecular & Cellular Proteomics, vol. 12, no. 1, pp. 228-236, 2013.

J. R.  S., D., J. M., S., S. M., and Giri, A. P., ?Resistome analysis of mycobacterium tuberculosis: identification of aminoglycoside 2?-nacetyltransferase (AAC) as co-target for drug desigining?, Bioinformation, vol. 9, no. 4, pp. 174-181, 2013.

H. G.  Chidley, Kulkarni, R. S., Pujari, K. H., Giri, A. P., and Gupta, V. S., ?Spatial and temporal changes in the volatile profile of alphonso mango upon exogenous ethylene treatment?, Food Chemistry, vol. 136, no. 2, pp. 585-594, 2013.

M.  Mishra, Joshi, R. S., Gaikwad, S. M., Gupta, V. S., and Giri, A. P., ?Structural-functional insights of single and multi-domain capsicum annuum protease inhibitors?, Biochemical and Biophysical Research Communications, vol. 430, no. 3, pp. 1060-1065, 2013.

R. S.  Joshi, Gupta, V. S., and Giri, A. P., ?Differential antibiosis against helicoverpa armigera exerted by distinct inhibitory repeat domains of capsicum annuum proteinase inhibitors?, Phytochemistry, vol. 101, pp. 16-22, 2014.

P. R.  Lomate, Mahajan, N. S., Kale, S. M., Gupta, V. S., and Giri, A. P., ?Identification and expression profiling of helicoverpa armigera microRNAs and their possible role in the regulation of digestive protease genes?, Insect Biochemistry and Molecular Biology, vol. 54, pp. 129-137, 2014.

S.  Bhat, Mary, S., Banarjee, R., Giri, A. P., and Kulkarni, M. J., ?Immune response to chemically modified proteome?, Proteomics Clinical Applications, vol. 8, no. 1-2, pp. 19-34, 2014.

P.  Singh, Jayaramaiah, R. H., Sarate, P., Thulasiram, H. V., Kulkarni, M. J., and Giri, A. P., ?Insecticidal potential of defense metabolites from ocimum kilimandscharicum against helicoverpa armigera?, Plos One, vol. 9, no. 8, p. e104377, 2014.

R. S.  Joshi, Mishra, M., Tamhane, V. A., Ghosh, A., Sonavane, U., Suresh, C. G., Joshi, R., Gupta, V. S., and Giri, A. P., ?Remarkable efficiency of a pin-II proteinase inhibitor sans two conserved disulfide bonds is due to enhanced flexibility and hydrogen bond density in the reactive site loop?, Journal of Biomolecular Structure & Dynamics, vol. 32, no. 1, pp. 13-26, 2014.

R. S.  Joshi, Tanpure, R. S., Singh, R. Kumar, Gupta, V. S., and Giri, A. P., ?Resistance through inhibition: ectopic expression of serine protease inhibitor offers stress tolerance via delayed senescence in yeast cell?, Biochemical and Biophysical Research Communications, vol. 452, no. 3, pp. 361-368, 2014.

N. S.  Mahajan, Mishra, M., Tamhane, V. A., Gupta, V. S., and Giri, A. P., ?Stress inducible proteomic changes in capsicum annuum leaves?, Plant Physiology and Biochemistry, vol. 74, pp. 212-217, 2014.

R. S.  Joshi, Wagh, T. P., Sharma, N., Mulani, F. A., Sonavane, U., Thulasiram, H. V., Joshi, R. S., Gupta, V. S., and Giri, A. P., ?Way toward ``dietary pesticides'': molecular investigation of insecticidal action of caffeic acid against helicoverpa armigera?, Journal of Agricultural and Food Chemistry, vol. 62, pp. 10847-10854, 2014.

A. J.  Bhide, Channale, S. M., Patil, S. S., Gupta, V. S., Ramasamy, S., and Giri, A. P., ?Biochemical, structural and functional diversity between two digestive alpha-amylases from helicoverpa armigera?, Biochimica Et Biophysica Acta-General Subjects, vol. 1850, no. 9, pp. 1719-1728, 2015.

N.  Khandelwal, Doke, D. S., Khandare, J. J., Jawale, P. V., Biradar, A. V., and Giri, A. P., ?Bio-physical evaluation and in vivo delivery of plant proteinase inhibitor immobilized on silica nanospheres?, Colloids and Surfaces B-Biointerfaces, vol. 130, pp. 84-92, 2015.

N.  Saikhedkar, Summanwar, A., Joshi, R. S., and Giri, A. P., ?Cathepsins of lepidopteran insects: aspects and prospects?, Insect Biochemistry and Molecular Biology, vol. 64, pp. 51-59, 2015.

A. M.  Korwar, Vannuruswamy, G., Jagadeeshaprasad, M. G., Jayaramaiah, R. H., Bhat, S., Regin, B. S., Ramaswamy, S., Giri, A. P., Mohan, V., Balasubramanyam, M., and Kulkarni, M. J., ?Development of diagnostic fragment ion library for glycated peptides of human serum albumin: targeted quantification in prediabetic, diabetic, and microalbuminuria plasma by parallel reaction monitoring, SWATH, and MSE?, Molecular & Cellular Proteomics, vol. 14, no. 8, pp. 2150-2159, 2015.

M.  Mishra, Lomate, P. R., Joshi, R. S., Punekar, S. A., Gupta, V. S., and Giri, A. P., ?Ecological turmoil in evolutionary dynamics of plant-insect interactions: defense to offence?, Planta, vol. 242, no. 4, pp. 761-771, 2015.

Y.  Kumar, Dholakia, B. B., Panigrahi, P., Kadoo, N. Y., Giri, A. P., and Gupta, V. S., ?Metabolic profiling of chickpea-Fusarium interaction identifies differential modulation of disease resistance pathways?, Phytochemistry, vol. 116, pp. 120-129, 2015.

N. S.  Mahajan, Dewangan, V., Lomate, P. R., Joshi, R. S., Mishra, M., Gupta, V. S., and Giri, A. P., ?Structural features of diverse Pin-II proteinase inhibitor genes from capsicum annuum?, Planta, vol. 241, no. 2, pp. 319-331, 2015.

P.  Singh, Kalunke, R. M., and Giri, A. P., ?Towards comprehension of complex chemical evolution and diversification of terpene and phenylpropanoid pathways in Ocimum species?, RSC Advances, vol. 5, no. 129, pp. 106886-106904, 2015.

N.  Khandelwal, Barbole, R. S., Banerjee, S. S., Chate, G. P., Biradar, A. V., Khandare, J. J., and Giri, A. P., ?Budding trends in integrated pest management using advanced micro- and nano-materials: challenges and perspectives?, Journal of Environmental Management, vol. 184, pp. 157-169, 2016.

A. V.  Bagade, Bachate, S. P., Dholakia, B. B., Giri, A. P., and Kodam, K. M., ?Characterization of roseomonas and nocardioides spp. for arsenic transformation?, Journal of Hazardous Materials, vol. 318, pp. 742-750, 2016.

S. M.  Channale, Bhide, A. J., Yadav, Y., Kashyap, G., Pawar, P. K., Maheshwari, V. L., Ramasamy, S., and Giri, A. P., ?Characterization of two coleopteran alpha-amylases and molecular insights into their differential inhibition by synthetic alpha-amylase inhibitor, acarbose?, Insect Biochemistry and Molecular Biology, vol. 74, pp. 1-11, 2016.

A.  Anand, Jayaramaiah, R. H., Beedkar, S. D., Singh, P. A., Joshi, R. S., Mulani, F. A., Dholakia, B. B., Punekar, S. A., Gade, W. N., Thulasiram, H. V., and Giri, A. P., ?Comparative functional characterization of eugenol synthase from four different ocimum species: implications on eugenol accumulation?, Biochimica Et Biophysica Acta-Proteins and Proteomics, vol. 1864, no. 11, pp. 1539-1547, 2016.

V. V.  Dawkar, Chikate, Y. R., More, T. H., Gupta, V. S., and Giri, A. P., ?Expression of proteins involved in digestion and detoxification are regulated in helicoverpa armigera to cope up with chlorpyrifos insecticide?, Insect Science, vol. 23, no. 1, pp. 68-77, 2016.

R. H.  Jayaramaiah, Anand, A., Beedkar, S. D., Dholakia, S. B., Punekar, S. A., Kalunke, R. M., Gade, W. N., Thulasiram, H. V., and Giri, A. P., ?Functional characterization and transient expression manipulation of a new sesquiterpene synthase involved in beta-caryophyllene accumulation in Ocimum?, Biochemical And Biophysical Research Communications, vol. 473, no. 1, pp. 265-271, 2016.

Y.  Kumar, Zhang, L., Panigrahi, P., Dholakia, B. B., Dewangan, V., Chavan, S. G., Kunjir, S. M., Wu, X., Li, N., Rajmohanan, P. R., Kadoo, N. Y., Giri, A. P., Tang, H., and Gupta, V. S., ?Fusarium oxysporum mediates systems metabolic reprogramming of chickpea roots as revealed by a combination of proteomics and metabolomics?, Plant Biotechnology Journal, vol. 14, no. 7, pp. 1589-1603, 2016.

P. D.  Cardenas, Sonawane, P. D., Pollier, J., Bossche, R. Vanden, Dewangan, V., Weithorn, E., Tal, L., Meir, S., Rogachev, I., Malitsky, S., Giri, A. P., Goossens, A., Burdman, S., and Aharoni, A., ?GAME9 regulates the biosynthesis of steroidal alkaloids and upstream isoprenoids in the plant mevalonate pathway?, Nature Communications, vol. 7, p. Article Number: 10654, 2016.

H. G.  Chidley, Oak, P. S., Deshpande, A. B., Pujari, K. H., Giri, A. P., and Gupta, V. S., ?Molecular cloning and characterization of O-methyltransferase from mango fruit (mangifera indica cv. alphonso)?, Molecular Biotechnology, vol. 58, no. 5, pp. 340-350, 2016.

Y.  Sanap, Dawkar, V. V., Giri, A. P., Sen, A., and Pandit, R. S., ?Parasitism by Chelonus blackburni (Hymenoptera) affects food consumption and development of Helicoverpa armigera (Lepidoptera) and cellular architecture of the midgut?, Journal of Asia-Pacific Entomology, vol. 19, no. 1, pp. 65-70, 2016.

P.  Singh, Jayaramaiah, R. H., Agawane, S. B., Vannuruswamy, G., Korwar, A. M., Anand, A., Dhaygude, V. S., Shaikh, M. L., Joshi, R. S., Boppana, R., Kulkarni, M. J., Thulasiram, H. V., and Giri, A. P., ?Potential dual role of eugenol in inhibiting advanced glycation end products in diabetes: proteomic and mechanistic insights?, Scientific Reports, vol. 6, 2016.

S.  Bhat, Jagadeeshaprasad, M. G., Patil, Y. R., Shaikh, M. L., Regin, B. S., Mohan, V., Giri, A. P., Balasubramanyam, M., Boppana, R., and Kulkarni, M. J., ?Proteomic insight reveals elevated levels of albumin in circulating immunecomplexes in diabetic plasma?, Molecular & Cellular Proteomics, vol. 15, no. 6, pp. 2011-2020, 2016.

Y. R.  Chikate, Dawkar, V. V., Barbole, R. S., Tilak, P. V., Gupta, V. S., and Giri, A. P., ?RNAi of selected candidate genes interrupts growth and development of Helicoverpa armigera?, Pesticide Biochemistry and Physiology, vol. 133, pp. 44-51, 2016.

S.  Mary, Kulkarni, M. J., Mehendale, S. S., Joshi, S. R., and Giri, A. P., ? Differential accumulation of vimentin fragments in preeclamptic placenta?, Cytoskeleton, vol. 74, no. 11, pp. 420-425, 2017.

B. A.  Shinde, Dholakia, B. B., Hussain, K., Panda, S., Meir, S., Rogachev, I., Aharoni, A., Giri, A. P., and Kamble, A. C., ? Dynamic metabolic reprogramming of steroidal glycol-alkaloid and phenylpropanoid biosynthesis may impart early blight resistance in wild tomato (Solanum arcanum Peralta)?, Plant Molecular Biology, vol. 95, no. 4-5, pp. 411-423, 2017.

H. G.  Chidley, Deshpande, A. B., Oak, P. S., Pujari, K. H., Giri, A. P., and Gupta, V. S., ?Effect of postharvest ethylene treatment on sugar content, glycosidase activity and its gene expression in mango fruit?, Journal of the Science of Food and Agriculture, vol. 97  , no. 5 , pp. 1630-1639, 2017.

A. J.  Bhide, Channale, S. M., Yadav, Y., Bhattacharjee, K., Pawar, P. K., Maheshwari, V. L., Gupta, V. S., Ramasamy, S., and Giri, A. P., ?Genomic and functional characterization of coleopteran insect-specific alpha-amylase inhibitor gene from amaranthus species?, Plant Molecular Biology, vol.  94  , no. 3, pp. 319-332, 2017.

K.  Haratl, Huang, F. - C., Giri, A. P., Franz-Oberdorf, K., Frotscher, J., Shao, Y., Hoffmann, T., and Schwab, W., ?Glucosylation of smoke-derived volatiles in grapevine (vitis vinifera) is catalyzed by a promiscuous resveratrol/guaiacol glucosyltransferase?, Journal of Agricultural and Food Chemistry, vol. 65, no. 28, pp. 5681-5689, 2017.

S. S.  Kasar, Marathe, K. R., Bhide, A. J., Herwade, A. P., Giri, A. P., Maheshwari, V. L., and Pawar, P. K., ?Glycoprotein alpha-amylase inhibitor from Withania somnifera differentially inhibits various alpha-amylases and affects the growth and development of Tribolium castaneum?, PEST Management Science, vol. 73, no. 7, pp. 1382-1390, 2017.

R. S.  Tanpure, Barbole, R. S., Dawkar, V. V., Waichal, Y. A., Joshi, R. S., Giri, A. P., and Gupta, V. S., ?Improved tolerance against helicoverpa armigera in transgenic tomato over-expressing multi-domain proteinase inhibitor gene from capsicum annuum?, Physiology and Molecular Biology of Plants, vol. 23, no. 3, pp. 597-604, 2017.

A. B.  Deshpande, Chidley, H. G., Oak, P. S., Pujari, K. H., Giri, A. P., and Gupta, V. S., ?Isolation and characterization of 9-lipoxygenase and epoxide hydrolase 2 genes: insight into lactone biosynthesis in mango fruit (Mangifera indica L.)?, Phytochemistry, vol. 138, pp. 65-75, 2017.

S.  Mary, Kulkarni, M. J., Malakar, D., Joshi, S. Ramchandra, Mehendale, S. S., and Giri, A. P., ?Placental proteomics provides insights into pathophysiology of pre-eclampsia and predicts possible markers in plasma?, Journal of Proteome Research, vol. 16, no. 2, pp. 1050-1060, 2017.

S.  Banerjee, Giri, A. P., Gupta, V. S., and Dutta, S. Kumar, ?Structure-function relationship of a bio-pesticidal trypsin/chymotrypsin inhibitor from winged bean?, International Journal of Biological Macromolecules, vol. 96, pp. 532-537, 2017.

A. B.  Deshpande, Anamika, K., Jha, V., Chidley, H. G., Oak, P. S., Kadoo, N. Y., Pujari, K. H., Giri, A. P., and Gupta, V. S., ?Transcriptional transitions in alphonso mango (Mangifera indica L.) during fruit development and ripening explain its distinct aroma and shelf life characteristics?, Scientific Reports, vol. 7, no. Article Number: 8711, 2017.

S.  Mary, Kulkarni, M. J., Mehendale, S. S., Joshi, S. R., and Giri, A. P., ?Tubulointerstitial nephritis antigen-like 1 protein is downregulated in the placenta of pre-eclamptic women?, Clinical Proteomics, vol. 14, p. Article Number: 8, 2017.

P. R.  Lomate, Dewangan, V., Mahajan, N. S., Kumar, Y., Kulkarni, A., Wang, L., Saxena, S., Gupta, V. S., and Giri, A. P., ?Integrated transcriptomic and proteomic analyses suggest the participation of endogenous protease inhibitors in the regulation of protease gene expression in helicoverpa armigera?, Molecular & Cellular Proteomics, vol. 17, no. 7, pp. 1324-1336, 2018.

S. G.  Lavhale, Kalunke, R. M., and Giri, A. P., ? Structural, functional and evolutionary diversity of 4-coumarate-CoA ligase in plants?, Planta, vol. 248, no. 5, pp. 1063-1078, 2018.

N. S.  Saikhedkar, Joshi, R. S., Bhoite, A. S., Mohandasan, R., Yadav, A. Kumar, and Giri, A. P., ?Tripeptides derived from reactive centre loop of potato type II protease inhibitors preferentially inhibit midgut proteases of Helicoverpa armigera?, Insect Biochemistry and Molecular Biology , vol. 95, pp. 17-25, 2018.

B. A.  Shinde, Dholakia, B. B., Hussain, K., Aharoni, A., Giri, A. P., and Kamble, A. C., ?WRKY1 acts as a key component improving resistance against Alternaria solani in wild tomato, Solanum arcanum Peralta?, Plant Biotechnology Journal , vol. 16, no. 8, pp. 1502-1513, 2018.

V. V.  Dawkar, Barage, S. H., Barbole, R. S., Fatangare, A., Grimalt, S., Haldar, S., Heckel, D. G., Gupta, V. S., Thulasiram, H. V., Svatos, A., and Giri, A. P., ?Azadirachtin-A from azadirachta indica impacts multiple biological targets in cotton bollworm helicoverpa armigera?, ACS Omega, vol. 4, no. 5, pp. 9531-9541, 2019.

J.  Gartia, Anangi, R., Joshi, R. S., Giri, A. P., King, G. F., Barnwal, R. P., and Chary, K. V. R., ?NMR structure and dynamics of inhibitory repeat domain variant 12, a plant protease inhibitor from Capsicum annuum, and its structural relationship to other plant protease inhibitors?, Journal of Biomolecular Structure & Dynamics, 2019.

N. S.  Sailthedkar, Joshi, R. S., Yadav, A. K., Seal, S., Fernandes, M., and Giri, A. P., ?Phyto-inspired cyclic peptides derived from plant Pin-II type protease inhibitor reactive center loops for crop protection from insect pests?, Biochimica ET Biophysica Acta-General Subjects, vol. 1863, no. 8, pp. 1254-1262, 2019.

R. P.  Vidhate, Bhide, A. J., Gaikwad, S. M., and Giri, A. P., ?Potent chitin-hydrolyzing enzyme from Myrothecium verrucaria affects growth and development of Helicoverpa armigera and plant fungal pathogens?, International Journal of Biological Macromolecules, vol. 141, pp. 517-528, 2019.

A.  Anand, Jayaramaiah, R. H., Beedkar, S. D., Dholakia, B. B., Lavhale, S. G., Punekar, S. A., Gade, W. N., Thulasiram, H. V., and Giri, A. P., ?Terpene profiling, transcriptome analysis and characterization of cis?terpineol synthase from Ocimum?, Physiology and Molecular Biology of Plants, vol. 25, no. 1, pp. 47-57, 2019.

P.  Singh, Kalunke, R. M., Shukla, A., Tzfadia, O., V. Thulasiram, H., and Giri, A. P., ?Biosynthesis and tissue-specific partitioning of camphor and eugenol in Ocimum kilimandscharicum?, Phytochemistry, vol. 177, p. 112451, 2020.

M.  Pandey, Dholakia, B. B., Jayaramaiah, R. H., Punekar, S. A., and Giri, A. P., ?Combinatorial approach through in vitro regeneration and phytochemical profiling of ceropegia media (huber) ans.: a potential way forward in the conservation of an endangered medicinal plant from the western ghats in India?, Journal of Plant Growth Regulation, 2020.

S.  M. Dar, Dholakia, B. B., Shanmugam, H., Gupta, V. S., Subramanian, K. S., Subramanian, J., and Giri, A. P., ?Differential modulation in metabolites revealed with the improvement in the shelf-life of alphonso fruits?, Molecular Biotechnology, vol. 62, no. 10, pp. 508-520, 2020.

R. S.  Joshi, Jagdale, S. S., Bansode, S. B., S. Shankar, S., Tellis, M. B., Pandya, V. Kumar, Chugh, A., Giri, A. P., and Kulkarni, M. J., ?Discovery of potential multi-target-directed ligands by targeting host-specific SARS-CoV-2 structurally conserved main protease?, Journal of Biomolecular Structure & Dynamics, 2020.

T. P.  Gurav, Jayaramaiah, R. H., Punekar, S. A., Dholakia, B. B., and Giri, A. P., ?Generation of novelties in the genus Ocimum as a result of natural hybridization: a morphological, genetical and chemical appraisal?, Industrial Crops and Products, vol. 156, p. 112859, 2020.

S. A.  Gharat, Shinde, B. A., Mule, R. D., Punekar, S. A., Dholakia, B. B., Jayaramaiah, R. H., Ramaswamy, G., and Giri, A. P., ?High-throughput metabolomic and transcriptomic analyses vet the potential route of cerpegin biosynthesis in two varieties of Ceropegia bulbosa Roxb.?, Planta, vol. 251, no. 1, p. 28, 2020.

A. S.  Rane, Joshi, R. S., and Giri, A. P., ?Molecular determinant for specificity: differential interaction of alpha-amylases with their proteinaceous inhibitors?, Biochimica Et Biophysica Acta-General Subjects, vol. 1864, no. 12, p. 129703, 2020.

A. S.  Rane, Venkatesh, V., Joshi, R. S., and Giri, A. P., ?Molecular investigation of coleopteran specific alpha-amylase inhibitors from amaranthaceae members?, International Journal of Biological Macromolecules, vol. 163, pp. 1444-1450, 2020.

R. S.  Joshi, Giri, A. P., Kulkarni, M. J., Gupta, M., Verma, S., Chaudhry, D., Deshmukh, N., and Chugh, A., ?Antiviral drugs prioritization for COVID-19 management based on rational selection?, Current Science, vol. 120, no. 9, pp. 1464-1470, 2021.

K. R.  Kondhare, Patil, A. B., and Giri, A. P., ?Auxin: an emerging regulator of tuber and storage root development?, Plant Science, vol. 306, p. 110854, 2021.

S.  Bhambhani, Kondhare, K. R., and Giri, A. P., ?Diversity in chemical structures and biological properties of plant alkaloids?, Molecules, vol. 26, no. 11, p. 3374, 2021.

S.  Jagdale, Rao, U., and Giri, A. P., ?Effectors of root-knot nematodes: an arsenal for successful parasitism?, Frontiers in Plant Science, vol. 12, 2021.

S. G.  Lavhale, Joshi, R. S., Kumar, Y., and Giri, A. P., ?Functional insights into two Ocimum kilimandscharicum 4-coumarate-CoA ligases involved in phenylpropanoid biosynthesis?, International Journal of Biological Macromolecules, vol. 181, pp. 202-210, 2021.

S.  M. Dar, Dholakia, B. B., Kulkarni, A. P., Oak, P. S., Shanmugam, D., Gupta, V. S., and Giri, A. P., ?Influence of domestication on specialized metabolic pathways in fruit crops?, Planta, vol. 253, no. 2, p. 61, 2021.

N. K.  Yadav, Saikhedkar, N. S., and Giri, A. P., ?PINIR: a comprehensive information resource for Pin-II type protease inhibitors?, BMC Plant Biology, vol. 21, no. 1, p. 267, 2021.

P. D.  Sonawane, Jozawiak, A., Barbole, R., Panda, S., Abebie, B., Kazachkova, Y., Gharat, S. A., Ramot, O., Unger, T., Wizler, G., Meir, S., Rogachev, I., Doron-Faigenboim, A., Petreikov, M., Schaffer, A., Giri, A. P., Scherf, T., and Aharoni, A., ?2-oxoglutarate-dependent dioxygenases drive expansion of steroidal alkaloid structural diversity in the genus Solanum?, New Phytologist, vol. 234, no. 4, pp. 1394-1410, 2022.

S.  Bhambhani, Kondhare, K. R., and Giri, A. P., ?Advanced genome editing strategies for manipulation of plant specialized metabolites pertaining to biofortification?, Phytochemistry Reviews, vol. 21, no. 1, pp. 81-99, 2022.

G. S.  Kallure, Kumari, A., Shinde, B. A., and Giri, A. P., ?Characterized constituents of insect herbivore oral secretions and their influence on the regulation of plant defenses?, Phytochemistry, vol. 193, p. 113008, 2022.

G. S.  Kallure, Shinde, B. A., Barvkar, V. T., Kumari, A., and Giri, A. P., ?Dietary influence on modulation of Helicoverpa armigera oral secretion composition leading to differential regulation of tomato plant defense.?, Plant Science, vol. 314, p. 111120, 2022.

P. R.  Barve, Tellis, M. B., Barvkar, V. T., Joshi, R. S., Giri, A. P., and Kotkar, H. M., ?Functional diversity of the lepidopteran ATP-binding cassette transporters?, Journal of Molecular Evolution, vol. 90, no. 3-4, pp. 258-270, 2022.

T. P.  Gurav, Dholakia, B. B., and Giri, A. P., ?Glance at the chemodiversity of Ocimum species: Trends, implications, and strategies for the quality and yield improvement of essential oil?, Phytochemistry Reviews, vol. 21, no. 3, pp. 879-913, 2022.

A.  Ghosh, Pawar, A. B., Chirmade, T., Jathar, S. M., Bhambure, R., Sengupta, D., Giri, A. P., and Kulkarni, M. J., ?Investigation of the captopril-insulin interaction by mass spectrometry and computational approaches reveals that captopril induces structural changes in insulin?, ACS Omega, vol. 7, no. 27, pp. 23115-23126, 2022.

S.  Panda, Jozwiak, A., Sonawane, P. D., Szymanski, J., Kazachkova, Y., Vainer, A., Kilambi, H. Vasuki, Almekias-Siegl, E., Dikaya, V., Bocobza, S., Shohat, H., Meir, S., Wizler, G., Giri, A. P., Schuurink, R., Weiss, D., Yasuor, H., Kamble, A., and Aharoni, A., ?Steroidal alkaloids defence metabolism and plant growth are modulated by the joint action of gibberellin and jasmonate signalling?, New Phytologist, vol. 233, no. 3, pp. 1220-1237, 2022.

P. D.  Sonawane, Gharat, S. A., Jozwiak, A., Barbole, R., Heinicke, S., Almekias-Siegl, E., Meir, S., Rogachev, I., O'Connor, S. E., Giri, A. P., and Aharoni, A., ?BAHD-type acyltransferase concludes the biosynthetic pathway of non-bitter glycoalkaloids in ripe tomato fruit?, Nature Communications, vol. 14, no. 1, p. 4540, 2023.

A. S.  Rane, Nair, V. S., Joshi, R. S., and Giri, A. P., ?Domain shuffling and site-saturation mutagenesis for the enhanced inhibitory potential of amaranthaceae ?-amylase inhibitors?, Protein Journal, vol. 42, no. 5, pp. 519-532, 2023.

R. P.  Vidhate, Dawkar, V. V., Punekar, S. A., and Giri, A. P., ?Genomic determinants of entomopathogenic fungi and their involvement in pathogenesis?, Microbial Ecology, vol. 85, no. 1, pp. 49-60, 2023.

B. H.  Mishal, Das, S., Mahajan, V. N., Dharne, M. S., Joshi, R. S., and Giri, A. P., ?Adsorption based downstream processing approach for penicillin V from a Penicillium chrysogenum BIONCL I22 culture filtrate?, ACS Omega, vol. 9, no. 24, pp. 25859-25869, 2024.

G. S.  Kallure, Sahoo, S. Shekhar, Kale, R. S., Barvkar, V. T., Kontham, R., and Giri, A. P., ?Aminoacylase efficiently hydrolyses fatty acid amino acid conjugates of Helicoverpa armigera potentially to increase the pool of glutamine?, Insect Biochemistry and Molecular Biology , vol. 165, 2024.

T. B.  Vare, Joshi, R. S., and Giri, A. P., ?Aroma Alchemy: uridine diphosphate-dependent glycosyltransferases mediated regulation of fruit aroma and flavor biosynthesis?, Phytochemistry Reviews, 2024.

R. S.  Barbole, Sharma, S., Patil, Y., Giri, A. P., and Joshi, R. S., ?Article chitinase inhibition induces transcriptional dysregulation altering ecdysteroid-mediated control of spodoptera frugiperda development?, Iscience, vol. 27, no. 3, 2024.

R. S.  Barbole, Joshi, R. S., and Giri, A. P., ?Engineering inhibitory repeat domains of Pin-II type proteinase inhibitors indicate their high structural-functional tolerance to mutagenesis?, Biochemical and Biophysical Research Communications, vol. 735, p. 150808, 2024.

A.  Ghosh, Jani, V., Sonavane, U., Naphade, A. N., Joshi, R., Kulkarni, M. J., and Giri, A. P., ?Multi-dimensional impact of captopril modification on human serum albumin?, International Journal of Biological Macromolecules, vol. 274, p. 133289, 2024.

S. G.  Lavhale, Kondhare, K. R., Sinthadurai, V. S., Barvkar, V. T., Kale, R. S., Joshi, R. S., and Giri, A. P., ?Ocimum kilimandscharicum 4CL11 negatively regulates adventitious root development via accumulation of flavonoid glycosides?, Plant Journal, vol. 119, no. 1, pp. 176-196, 2024.

P. R.  Barve, Barvkar, V. T., Giri, A. P., and Kotkar, H. M., ?High levels of sinigrin trigger synthesis of fatty acids in Plutella xylostella (L.)?, Comparative Biochemistry and Physiology D-Genomics & Proteomics, vol. 54, p. 101424, 2025.

P. A.  Bhatt, Gurav, T. P., Kondhare, K. R., and Giri, A. P., ?MYB proteins: Versatile regulators of plant development, stress responses, and secondary metabolite biosynthetic pathways?, International Journal of Biological Macromolecules, vol. 288, p. 138588, 2025.

P. M.  Dongare, Madage, V. A., V. Deshpande, N., Joshi, R. S., Giri, A. P., and Pawar, P. K., ?Novel bifunctional inhibitor of protease and ?-amylase from Clitorea ternatea restricts the growth and development in Spodoptera frugiperda?, International Journal of Biological Macromolecules, vol. 305, p. 141180, 2025.